3.10.21. Annotate Variants Matching Current Sample

This algorithm annotates against variants in the selected source, and filters the results to variants with a sample field that matches the current sample.

Requirements

A variant annotation source to use for annotating variants, with a string field that contains the sample name which should be matched to.

Options

The user must specify the following options:

  • Variant Source: The variant source use as an annotation.

  • Sample Name Field: The field in the variant source to match to the current sample

Output

The output includes the columns for the selected source. If multiple features match the variant and sample then the values from the last matching feature are used. If a variant does not have a matching feature the fields will be filled in with missing values.