3.10.19. Match Panels (Per Sample)¶
This algorithm determines matches for each sample between the gene annotations of each variant and a user imported list of gene panels unique to each sample.
Each sample must be paired with a list of gene panel names during the data import, see Import Sample Information from Text File. Each panel name must correspond to a gene panel specified in the Manage Gene Panels interface. This can be accessed by clicking Tools -> Manage Gene Panels in VarSeq.
This algorithm requires first annotating and classifying variants using a gene annotation source.
After clicking OK you will be prompted to select a Gene Names field to be used for matching.
After clicking OK a second time you will be prompted to select the sample Gene Panel Names field which contains the list of gene panels that will be matched against.
A sample specific boolean column indicating whether the gene annotation for each variant matches at least one of the values given.