3.10.13. Match Gene List (Per Sample)

This algorithm determines matches for each sample between the gene annotations of each variant and a user imported list of gene or identifier symbols unique to each sample.

Note

This tool can also be used to match any string field with a list of string entries. For example matching a list of RS IDs to the Identifier field for your variants.

Requirements

Each sample must be paired with a gene list during the initial data import, see Import Sample Information from Text File.

This algorithm requires first annotating and classifying variants using a gene annotation source.

After clicking OK you will be prompted to select a Gene Names field to be used for matching.

After clicking OK a second time you will be prompted to select the sample Gene List field which contains the list of gene names that will be matched against.

Output

A sample specific boolean column indicating whether the gene annotation for each variant matches at least one of the values given.