Updated: February 7th, 2012
Level: Intermediate
Packages: SNP Analysis, CNV Analysis, RNA-Seq Analysis, Power Seat
Contents: Jump to Table of Contents
This tutorial provides an in-depth look at the SVS 7 Regression Module. It will cover controlling for confounding variables, model comparison, and stepwise regression. The genotype spreadsheet included in the project file contains PCA-corrected numeric SNP columns for an additive model. The phenotype information is simulated.
If you are interested in learning how to set up a linear regression model, please read our blog post on the topic.
Requirements
To complete this tutorial you will need to download and unzip the following file, which includes a Golden Helix Project File.
Download
File included in the above ZIP file:
Regression_Tutorial - SVS Project file containing mapped genotype information and a phenotype spreadsheet.
We hope you enjoy the experience and look forward to your feedback.
Table of Contents: